ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w4zA1 - ECOD Domain | ECOD

ECOD/Domains/e5w4zA1

e5w4zA1

UID: 002406430

PDB

Range: A:7-452
PDB: 5W4Z chain A(all domains)
UniProt: A0A3B6UEK8 (all domains)
Gene: RcaE

Molecule: Riboflavin Lyase

3D Structure

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Related Domains

Browse other domains in Bac_luciferase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyBac_luciferase(2002.1.1.16)

Ligands

in contact, ≤ 4 Å

RiboflavinRBF
drugDrugBank DB00140
1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)-3-O-phosphono-D-ribitol9WY

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00296Bac_luciferase

Luciferase-like monooxygenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5W4Z RCSB PDB: 5W4Z PDBe: 5W4Z UniProt: A0A3B6UEK8

Downloads

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