ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w79E2 - ECOD Domain | ECOD

ECOD/Domains/e5w79E2

e5w79E2

UID: 002406516

PDB

Range: E:141-210,E:362-399
PDB: 5W79 chain E(all domains)
UniProt: Q877G8 (all domains)

Molecule: Chaperonin

3D Structure

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Related Domains

Browse other domains in Cpn60_TCP1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupGroEL-intermediate domain like(2498.5)

TT-groupGroEL-intermediate domain like(2498.5.1)

FFamilyCpn60_TCP1(2498.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00118Cpn60_TCP1

TCP-1/cpn60 chaperonin family

External Links

ECOD PDB View: 5W79 RCSB PDB: 5W79 PDBe: 5W79 UniProt: Q877G8

Downloads

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