ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xrtB1 - ECOD Domain | ECOD

ECOD/Domains/e5xrtB1

e5xrtB1

UID: 002406886

PDB

Range: B:1-174
PDB: 5XRT chain B(all domains)
UniProt: R9XUW5 (all domains)
Gene: HA

Molecule: Hemagglutinin

3D Structure

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Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHemagglutinin HA2 chain(3847)

HH-groupHemagglutinin HA2 chain(3847.1)

TT-groupHemagglutinin HA2 chain(3847.1.1)

FFamilyHemagglutinin(3847.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 5XRT RCSB PDB: 5XRT PDBe: 5XRT UniProt: R9XUW5

Downloads

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