ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xrtF1 - ECOD Domain | ECOD

ECOD/Domains/e5xrtF1

e5xrtF1

UID: 002406888

PDB

Range: F:1-174
PDB: 5XRT chain F(all domains)
UniProt: R9XUW5 (all domains)
Gene: HA

Molecule: Hemagglutinin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHemagglutinin HA2 chain(3847)

HH-groupHemagglutinin HA2 chain(3847.1)

TT-groupHemagglutinin HA2 chain(3847.1.1)

FFamilyHemagglutinin(3847.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 5XRT RCSB PDB: 5XRT PDBe: 5XRT UniProt: R9XUW5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure