ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y0tB1 - ECOD Domain | ECOD

ECOD/Domains/e5y0tB1

e5y0tB1

UID: 002407315

PDB

Range: B:1-286
PDB: 5Y0T chain B(all domains)
UniProt: Q9X1K1 (all domains)
Gene: tmcAL

Molecule: Thermotoga maritima TmcAL

3D Structure

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Related Domains

Browse other domains in HIGH_NTase1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyHIGH_NTase1(2005.1.1.25)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-Rp-Alpha-Thio-TriphosphateTAT
drugDrugBank DB02355

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05636HIGH_NTase1

HIGH Nucleotidyl Transferase

ClanCL0039HUP

External Links

ECOD PDB View: 5Y0T RCSB PDB: 5Y0T PDBe: 5Y0T UniProt: Q9X1K1

Downloads

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