ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y1kA3 - ECOD Domain | ECOD

ECOD/Domains/e5y1kA3

e5y1kA3

UID: 002407345

PDB

Range: A:746-1085
PDB: 5Y1K chain A(all domains)
UniProt: O96935 (all domains)
Gene: M1AAP

Molecule: M1 family aminopeptidase

3D Structure

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Related Domains

Browse other domains in DUF3458_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyDUF3458_C(109.4.1.241)

Ligands

in contact, ≤ 4 Å

(2S)-2-[(2-chlorophenyl)methylcarbamoylamino]-4-methyl-N-oxidanyl-pentanamideB1B
Magnesium ionMG
metal

+ 1 additive (Glycerol)

Glycerol

Pfam Families

PF17432DUF3458_C

Domain of unknown function (DUF3458_C) ARM repeats

ClanCL0020TPR

External Links

ECOD PDB View: 5Y1K RCSB PDB: 5Y1K PDBe: 5Y1K UniProt: O96935

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.