ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y3sD1 - ECOD Domain | ECOD

ECOD/Domains/e5y3sD1

e5y3sD1

UID: 002407401

PDB

Range: D:788-986
PDB: 5Y3S chain D(all domains)
UniProt: Q9C000 (all domains)
Gene: NLRP1

Molecule: NACHT, LRR and PYD domains-containing protein 1

3D Structure

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Related Domains

Browse other domains in LRR_1,LRR_6 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1,LRR_6(207.1.1.47)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

Leucine Rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 5Y3S RCSB PDB: 5Y3S PDBe: 5Y3S UniProt: Q9C000

Downloads

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