ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y6mA2 - ECOD Domain | ECOD

ECOD/Domains/e5y6mA2

e5y6mA2

UID: 002407466

PDB

Range: A:183-319
PDB: 5Y6M chain A(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: Helicase domain from Genome polyprotein

3D Structure

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Related Domains

Browse other domains in Flavi_DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyFlavi_DEAD(2004.1.1.151)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Aluminum fluorideAF3
MANGANESE (II) IONMN

Pfam Families

PF07652Flavi_DEAD

Flavivirus DEAD domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5Y6M RCSB PDB: 5Y6M PDBe: 5Y6M UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.