ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5y6mA3 - ECOD Domain | ECOD

ECOD/Domains/e5y6mA3

e5y6mA3

UID: 002407467

PDB

Range: A:320-481
PDB: 5Y6M chain A(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: Helicase domain from Genome polyprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C(2004.1.1.30)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Aluminum fluorideAF3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5Y6M RCSB PDB: 5Y6M PDBe: 5Y6M UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure