ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5y9zB2 - ECOD Domain | ECOD

ECOD/Domains/e5y9zB2

e5y9zB2

UID: 002407549

PDB

Range: B:76-199
PDB: 5Y9Z chain B(all domains)
UniProt: O35543 (all domains)
Gene: Hpgds

Molecule: Hematopoietic prostaglandin D synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in GST_C_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupGlutathione S-transferase (GST)-C(109.1)

TT-groupGlutathione S-transferase (GST)-C(109.1.1)

FFamilyGST_C_3(109.1.1.7)

Ligands

in contact, ≤ 4 Å

GlutathioneGSH
drugDrugBank DB00143
Magnesium ionMG
metal

+ 2 additives (1,4-Dioxane, 1,2-ETHANEDIOL)

1,4-DioxaneDIO

Pfam Families

PF14497GST_C_3

Glutathione S-transferase, C-terminal domain

ClanCL0497GST_C

External Links

ECOD PDB View: 5Y9Z RCSB PDB: 5Y9Z PDBe: 5Y9Z UniProt: O35543

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03316

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.