ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ya1A2 - ECOD Domain | ECOD

ECOD/Domains/e5ya1A2

e5ya1A2

UID: 002407554

PDB

Range: A:263-504
PDB: 5YA1 chain A(all domains)
UniProt: P77432 (all domains)
Gene: lsrK

Molecule: Autoinducer-2 kinase

3D Structure

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Related Domains

Browse other domains in FGGY_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyFGGY_C(2484.1.1.32)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Hexane-1,6-DiolHEZ
drugDrugBank DB02210

+ 1 additive (Phosphate ion)

Pfam Families

FGGY family of carbohydrate kinases, C-terminal domain

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 5YA1 RCSB PDB: 5YA1 PDBe: 5YA1 UniProt: P77432

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.