ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yaaB1 - ECOD Domain | ECOD

ECOD/Domains/e5yaaB1

e5yaaB1

UID: 002407565

PDB

Range: B:169-318
PDB: 5YAA chain B(all domains)
UniProt: Q8BJ34 (all domains)
Gene: Marf1

Molecule: Meiosis regulator and mRNA stability factor 1

3D Structure

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Related Domains

Browse other domains in NYN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyNYN(2006.1.4.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NYN domain

ClanCL0280PIN

External Links

ECOD PDB View: 5YAA RCSB PDB: 5YAA PDBe: 5YAA UniProt: Q8BJ34

Downloads

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