ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yemC1 - ECOD Domain | ECOD

ECOD/Domains/e5yemC1

e5yemC1

UID: 002407657

PDB

Range: C:551-698
PDB: 5YEM chain C(all domains)
UniProt: M4GGR5 (all domains)

Molecule: Catalase

3D Structure

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Related Domains

Browse other domains in Catalase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyCatalase_C(2007.1.1.20)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18011Catalase_C

C-terminal domain found in long catalases

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 5YEM RCSB PDB: 5YEM PDBe: 5YEM UniProt: M4GGR5

Downloads

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