ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yemC2 - ECOD Domain | ECOD

ECOD/Domains/e5yemC2

e5yemC2

UID: 002407658

PDB

Range: C:21-157,C:218-456
PDB: 5YEM chain C(all domains)
UniProt: M4GGR5 (all domains)

Molecule: Catalase

3D Structure

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Related Domains

Browse other domains in Catalase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupBarrel domain in heme-dependent catalases(4028)

HH-groupBarrel domain in heme-dependent catalases(4028.1)

TT-groupBarrel domain in heme-dependent catalases(4028.1.1)

FFamilyCatalase(4028.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00199Catalase

Catalase

External Links

ECOD PDB View: 5YEM RCSB PDB: 5YEM PDBe: 5YEM UniProt: M4GGR5

Downloads

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