ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yemC3 - ECOD Domain | ECOD

ECOD/Domains/e5yemC3

e5yemC3

UID: 002407659

PDB

Range: C:457-550
PDB: 5YEM chain C(all domains)
UniProt: M4GGR5 (all domains)

Molecule: Catalase

3D Structure

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Related Domains

Browse other domains in Catalase-rel →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSecond alpha-helical domain in heme-dependent catalases(4048)

HH-groupSecond alpha-helical domain in heme-dependent catalases(4048.1)

TT-groupSecond alpha-helical domain in heme-dependent catalases(4048.1.1)

FFamilyCatalase-rel(4048.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06628Catalase-rel

Catalase-related immune-responsive

External Links

ECOD PDB View: 5YEM RCSB PDB: 5YEM PDBe: 5YEM UniProt: M4GGR5

Downloads

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