ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ypaB1 - ECOD Domain | ECOD

ECOD/Domains/e5ypaB1

e5ypaB1

UID: 002407821

PDB

Range: B:-3-47
PDB: 5YPA chain B(all domains)
UniProt: P11021 (all domains)
Gene: HSPA5

Molecule: 78 kDa glucose-regulated protein,Sequestosome-1

3D Structure

Loading viewer...

Related Domains

Browse other domains in ZZ →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyZZ(376.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zinc finger, ZZ type

ClanCL0229RING

External Links

ECOD PDB View: 5YPA RCSB PDB: 5YPA PDBe: 5YPA UniProt: P11021

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure