ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yrkB1 - ECOD Domain | ECOD

ECOD/Domains/e5yrkB1

e5yrkB1

UID: 002407908

PDB

Range: B:20-161
PDB: 5YRK chain B(all domains)
UniProt: A0A2Z5V8U8 (all domains)
Gene: PPL3-b

Molecule: PPL3-b

3D Structure

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Related Domains

Browse other domains in Jacalin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Prism I(76)

HH-groupbeta-Prism I(76.1)

TT-groupbeta-Prism I(76.1.1)

FFamilyJacalin(76.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01419Jacalin

Jacalin-like lectin domain

ClanCL0568Man_lectin

External Links

ECOD PDB View: 5YRK RCSB PDB: 5YRK PDBe: 5YRK UniProt: A0A2Z5V8U8

Downloads

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