ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z58M1 - ECOD Domain | ECOD

ECOD/Domains/e5z58M1

e5z58M1

UID: 002408285

PDB

Range: M:191-226
PDB: 5Z58 chain M(all domains)
UniProt: O15541 (all domains)
Gene: RNF113A

Molecule: RING finger protein 113A

3D Structure

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Related Domains

Browse other domains in zf-CCCH →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCCH zinc finger(906)

HH-groupCCCH zinc finger(906.1)

TT-groupCCCH zinc finger(906.1.1)

FFamilyzf-CCCH(906.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00642zf-CCCH

Zinc finger C-x8-C-x5-C-x3-H type (and similar)

ClanCL0537CCCH_zf

External Links

ECOD PDB View: 5Z58 RCSB PDB: 5Z58 PDBe: 5Z58 UniProt: O15541

Downloads

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