ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1cknB1 - ECOD Domain | ECOD

ECOD/Domains/e1cknB1

e1cknB1

UID: 000024084

PDB

Range: B:239-327
PDB: 1CKN chain B(all domains)
UniProt: Q84424 (all domains)
Gene: A103R

Molecule: MRNA CAPPING ENZYME

3D Structure

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Related Domains

Browse other domains in mRNA_cap_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilymRNA_cap_C(2.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03919mRNA_cap_C

mRNA capping enzyme, C-terminal domain

ClanCL0021OB

External Links

ECOD PDB View: 1CKN RCSB PDB: 1CKN PDBe: 1CKN UniProt: Q84424

Downloads

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