ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z8xC1 - ECOD Domain | ECOD

ECOD/Domains/e5z8xC1

e5z8xC1

UID: 002408413

PDB

Range: C:34-361
PDB: 5Z8X chain C(all domains)
UniProt: O43300 (all domains)
Gene: LRRTM2

Molecule: Leucine-rich repeat transmembrane neuronal protein 2

3D Structure

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Related Domains

Browse other domains in LRR_1, LRR_5, LRR_8 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1, LRR_5, LRR_8(207.1.1.130)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

BspA type Leucine rich repeat region (6 copies)

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 5Z8X RCSB PDB: 5Z8X PDBe: 5Z8X UniProt: O43300

Downloads

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