ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5zm4A1 - ECOD Domain | ECOD

ECOD/Domains/e5zm4A1

e5zm4A1

UID: 002408860

PDB

Range: A:7-291
PDB: 5ZM4 chain A(all domains)
UniProt: A0A097ZPD5 (all domains)
Gene: andA

Molecule: Dioxygenase andA

3D Structure

Loading viewer...

Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
(6aS,8aR,12aS,12bR,13aR)-5,6a,9,9,12a,13a-hexamethyl-7,8,8a,9,12a,12b,13,13a-octahydro-3H-benzo[a]furo[3,4-j]xanthene-3,4,10(1H,6aH)-trione9FU
FE (III) ION

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 5ZM4 RCSB PDB: 5ZM4 PDBe: 5ZM4 UniProt: A0A097ZPD5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.