ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zm4D1 - ECOD Domain | ECOD

ECOD/Domains/e5zm4D1

e5zm4D1

UID: 002408863

PDB

Range: D:7-292
PDB: 5ZM4 chain D(all domains)
UniProt: A0A097ZPD5 (all domains)
Gene: andA

Molecule: Dioxygenase andA

3D Structure

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Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
(6aS,8aR,12aS,12bR,13aR)-5,6a,9,9,12a,13a-hexamethyl-7,8,8a,9,12a,12b,13,13a-octahydro-3H-benzo[a]furo[3,4-j]xanthene-3,4,10(1H,6aH)-trione9FU
FE (III) ION

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 5ZM4 RCSB PDB: 5ZM4 PDBe: 5ZM4 UniProt: A0A097ZPD5

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.