ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zznt1 - ECOD Domain | ECOD

ECOD/Domains/e5zznt1

e5zznt1

UID: 002409249

PDB

Range: t:1-30
PDB: 5ZZN chain t(all domains)
UniProt: Q8DIQ0 (all domains)
Gene: psbT

Molecule: Photosystem II reaction center protein T

3D Structure

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Related Domains

Browse other domains in PsbT →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein T, PsbT(3390)

HH-groupPhotosystem II reaction center protein T, PsbT(3390.1)

TT-groupPhotosystem II reaction center protein T, PsbT(3390.1.1)

FFamilyPsbT(3390.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll aCLA
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLELHG
2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

Pfam Families

Photosystem II reaction centre T protein

External Links

ECOD PDB View: 5ZZN RCSB PDB: 5ZZN PDBe: 5ZZN UniProt: Q8DIQ0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Unknown ligandUNL

+ 2 additives (Dimethyl sulfoxide, Dodecyl-beta-d-maltoside)

Dimethyl sulfoxideDMS
Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.