ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ocyA1 - ECOD Domain | ECOD

ECOD/Domains/e1ocyA1

e1ocyA1

UID: 002409264

PDB

Range: A:330-527
PDB: 1OCY chain A(all domains)
UniProt: P10930 (all domains)
Gene: 12

Molecule: BACTERIOPHAGE T4 SHORT TAIL FIBRE

3D Structure

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Related Domains

Browse other domains in Collar,S_tail_recep_bd →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupgp11/gp12 receptor-binding domain(877)

HH-groupgp11/gp12 receptor-binding domain(877.1)

TT-groupgp11/gp12 receptor-binding domain(877.1.1)

FFamilyCollar,S_tail_recep_bd(877.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Citric acid, Sulfate ion)

Citric acidCIT
DrugBank DB04272
Sulfate ion

Pfam Families

Phage Tail Collar Domain

ClanCL0779Head_shaft

PF14928S_tail_recep_bd

Short tail fibre protein receptor-binding domain

External Links

ECOD PDB View: 1OCY RCSB PDB: 1OCY PDBe: 1OCY UniProt: P10930

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.