ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yuyF2 - ECOD Domain | ECOD

ECOD/Domains/e5yuyF2

e5yuyF2

UID: 002409285

PDB

Range: F:0-22,F:76-177
PDB: 5YUY chain F(all domains)
UniProt: Q47155 (all domains)
Gene: dinB

Molecule: DNA polymerase IV

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
DiphosphateDPO
Magnesium ionMG

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 5YUY RCSB PDB: 5YUY PDBe: 5YUY UniProt: Q47155

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.