ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6f6dA1 - ECOD Domain | ECOD

ECOD/Domains/e6f6dA1

e6f6dA1

UID: 002409448

PDB

Range: A:1157-1291,A:1324-1487
PDB: 6F6D chain A(all domains)
UniProt: O15054 (all domains)
Gene: KDM6B

Molecule: Lysine-specific demethylase 6B

3D Structure

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Related Domains

Browse other domains in JmjC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC(10.12.1.9)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
tert-butanolTBU
drugDrugBank DB03900
FE (III) ION

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

External Links

ECOD PDB View: 6F6D RCSB PDB: 6F6D PDBe: 6F6D UniProt: O15054

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.