ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dgeA2 - ECOD Domain | ECOD

ECOD/Domains/e1dgeA2

e1dgeA2

UID: 000240963

PDB

Range: A:3-325
PDB: 1DGE chain A(all domains)
UniProt: P16932 (all domains)
Gene: dgdA

Molecule: DIALKYLGLYCINE DECARBOXYLASE

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Rubidium ionRB
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1DGE RCSB PDB: 1DGE PDBe: 1DGE UniProt: P16932

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-morpholino)ethanesulfonic acidMES

DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.