ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hk6F1 - ECOD Domain | ECOD

ECOD/Domains/e6hk6F1

e6hk6F1

UID: 002409897

PDB

Range: F:95-301
PDB: 6HK6 chain F(all domains)
UniProt: Q9BVS4 (all domains)
Gene: RIOK2

Molecule: Serine/threonine-protein kinase RIO2

3D Structure

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Related Domains

Browse other domains in RIO1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyRIO1(206.1.1.9)

Ligands

in contact, ≤ 4 Å

2-naphthalen-2-yl-~{N}-pyridin-2-yl-ethanamideG8H

+ 2 additives (HEPES, 1,2-ETHANEDIOL)

HEPESEPE
DrugBank DB16872
1,2-ETHANEDIOLEDO

Pfam Families

RIO domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6HK6 RCSB PDB: 6HK6 PDBe: 6HK6 UniProt: Q9BVS4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.