ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mn5D1 - ECOD Domain | ECOD

ECOD/Domains/e6mn5D1

e6mn5D1

UID: 002409924

PDB

Range: D:-1-258
PDB: 6MN5 chain D(all domains)
UniProt: Q306W4 (all domains)
Gene: aacC4

Molecule: Aminoglycoside N(3)-acetyltransferase, AAC(3)-IVa

3D Structure

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Related Domains

Browse other domains in Antibiotic_NAT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHypothetical protein TT1679(7547)

HH-groupHypothetical protein TT1679(7547.1)

TT-groupHypothetical protein TT1679(7547.1.1)

FFamilyAntibiotic_NAT(7547.1.1.1)

Ligands

in contact, ≤ 4 Å

Gentamicin C1aLLL
drugDrugBank DB04729
Zinc ionZN
metal

+ 4 additives (HEPES, Glycerin, 1,2-ETHANEDIOL, …)

Pfam Families

PF02522Antibiotic_NAT

Aminoglycoside 3-N-acetyltransferase

ClanCL0627Antibiotic_NAT

External Links

ECOD PDB View: 6MN5 RCSB PDB: 6MN5 PDBe: 6MN5 UniProt: Q306W4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLPE3

Shown in the structure viewer. Drug annotations from DrugDomain.