ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5z09A2 - ECOD Domain | ECOD

ECOD/Domains/e5z09A2

e5z09A2

UID: 002409948

PDB

Range: A:227-401
PDB: 5Z09 chain A(all domains)
UniProt: Q975F9 (all domains)
Gene: STK_04520

Molecule: Dual sugar-1-phosphate nucleotidylyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hexapep, GMPPB_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep, GMPPB_C(208.1.1.20)

Ligands

in contact, ≤ 4 Å

Uridine 5'-triphosphateUTP
drugDrugBank DB04005within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

PF25087GMPPB_C

GMPPB C-terminal domain

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 5Z09 RCSB PDB: 5Z09 PDBe: 5Z09 UniProt: Q975F9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure