ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yotA2 - ECOD Domain | ECOD

ECOD/Domains/e5yotA2

e5yotA2

UID: 002410127

PDB

Range: A:411-660
PDB: 5YOT chain A(all domains)
UniProt: Q2U8V9 (all domains)
Gene: AO090701000274

Molecule: Isoprimeverose-producing enzyme

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12)

TT-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12.1)

FFamilyGlyco_hydro_3_C(2007.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01915Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

External Links

ECOD PDB View: 5YOT RCSB PDB: 5YOT PDBe: 5YOT UniProt: Q2U8V9

Downloads

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Drug annotations from DrugDomain.