ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6gszA3 - ECOD Domain | ECOD

ECOD/Domains/e6gszA3

e6gszA3

UID: 002410587

PDB

Range: A:306-426
PDB: 6GSZ chain A(all domains)
UniProt: I0AZ41 (all domains)
Gene: alpha-Rha

Molecule: Alpha-L-rhamnosidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bac_rhamnosid →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyBac_rhamnosid(10.32.1.23)

Ligands

in contact, ≤ 4 Å

3-(N-morpholino)propanesulfonic acidMPO
drugDrugBank DB03434
Calcium ionCA
metal

+ 5 additives (Pentaethylene glycol, Acetate ion, 1,2-ETHANEDIOL, …)

Pentaethylene glycol1PE

Pfam Families

PF05592Bac_rhamnosid

Bacterial alpha-L-rhamnosidase concanavalin-like domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6GSZ RCSB PDB: 6GSZ PDBe: 6GSZ UniProt: I0AZ41

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Acetate ionACT

1,2-ETHANEDIOLEDO

Tetraethylene glycolPG4

Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.