ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gszA5 - ECOD Domain | ECOD

ECOD/Domains/e6gszA5

e6gszA5

UID: 002410589

RepresentativePDB

Range: A:2-111
PDB: 6GSZ chain A(all domains)
UniProt: I0AZ41 (all domains)
Gene: alpha-Rha

Molecule: Alpha-L-rhamnosidase

3D Structure

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Related Domains

Browse other domains in Ig_Rha78A_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_Rha78A_N(11.1.1.866)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-(2-METHOXYETHOXY)ETHANOLPG0

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF25788Ig_Rha78A_N

Rha78A-like, N-terminal immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 6GSZ RCSB PDB: 6GSZ PDBe: 6GSZ UniProt: I0AZ41

Downloads

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