ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vg2C1 - ECOD Domain | ECOD

ECOD/Domains/e5vg2C1

e5vg2C1

UID: 002411222

PDB

Range: C:56-259
PDB: 5VG2 chain C(all domains)
UniProt: T1K8P1 (all domains)
Gene: 107361576

Molecule: Intradiol ring-cleavage Dioxygenase

3D Structure

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Related Domains

Browse other domains in Dioxygenase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyDioxygenase_C(11.1.4.4)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00775Dioxygenase_C

Dioxygenase

ClanCL0287Transthyretin

External Links

ECOD PDB View: 5VG2 RCSB PDB: 5VG2 PDBe: 5VG2 UniProt: T1K8P1

Downloads

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