ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a0tA1 - ECOD Domain | ECOD

ECOD/Domains/e6a0tA1

e6a0tA1

UID: 002411429

PDB

Range: A:1-136
PDB: 6A0T chain A(all domains)
UniProt: Q5SL04 (all domains)
Gene: TTHA0489

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in NAD_binding_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyNAD_binding_3(2003.1.1.43)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
L-HomoserineHSE
drugDrugBank DB04193within 5 Å only

Pfam Families

PF03447NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6A0T RCSB PDB: 6A0T PDBe: 6A0T UniProt: Q5SL04

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.