ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6a0uB2 - ECOD Domain | ECOD

ECOD/Domains/e6a0uB2

e6a0uB2

UID: 002411432

PDB

Range: B:1-136
PDB: 6A0U chain B(all domains)
UniProt: Q5SL04 (all domains)
Gene: TTHA0489

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in NAD_binding_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyNAD_binding_3(2003.1.1.43)

Ligands

in contact, ≤ 4 Å

3-(cyclohexylamino)propanesulfonic acidCXS
drugDrugBank DB02219
L-HomoserineHSE
drugDrugBank DB04193

Pfam Families

PF03447NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6A0U RCSB PDB: 6A0U PDBe: 6A0U UniProt: Q5SL04

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Nicotinamide adenine dinucleotide phosphate

drugDrugBank DB03461

Sodium ionNA

metal

Unknown ligandUNL

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.