ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bicB1 - ECOD Domain | ECOD

ECOD/Domains/e6bicB1

e6bicB1

UID: 002411848

PDB

Range: B:-1-173
PDB: 6BIC chain B(all domains)
UniProt: Q83883 (all domains)
Gene: ORF1

Molecule: 3C-like protease

3D Structure

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Related Domains

Browse other domains in Peptidase_C37 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_C37(1.1.5.20)

Ligands

in contact, ≤ 4 Å

(phenylmethyl) ~{N}-[(9~{S},12~{S},15~{S})-9-(hydroxymethyl)-12-(2-methylpropyl)-6,11,14-tris(oxidanylidene)-1,5,10,13,18,19-hexazabicyclo[15.2.1]icosa-17(20),18-dien-15-yl]carbamate5LH

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05416Peptidase_C37

Southampton virus-type processing peptidase

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6BIC RCSB PDB: 6BIC PDBe: 6BIC UniProt: Q83883

Downloads

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