ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6by8A2 - ECOD Domain | ECOD

ECOD/Domains/e6by8A2

e6by8A2

UID: 002412048

PDB

Range: A:2-230
PDB: 6BY8 chain A(all domains)
UniProt: O00255 (all domains)
Gene: MEN1

Molecule: Menin

3D Structure

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Related Domains

Browse other domains in Menin →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyMenin(219.1.1.27)

Ligands

in contact, ≤ 4 Å

4-methyl-1-{[(2R)-5-oxomorpholin-2-yl]methyl}-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrileFNV

+ 4 additives (Sulfate ion, Dimethyl sulfoxide, 1,2-ETHANEDIOL, …)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Menin

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6BY8 RCSB PDB: 6BY8 PDBe: 6BY8 UniProt: O00255

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

1,2-ETHANEDIOLEDO

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.