ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dssB1 - ECOD Domain | ECOD

ECOD/Domains/e6dssB1

e6dssB1

UID: 002412770

PDB

Range: B:2-319
PDB: 6DSS chain B(all domains)
UniProt: Q8T6J6 (all domains)
Gene: ompdc

Molecule: Orotidine 5'-monophosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

Uridine monophosphateU5P
drugDrugBank DB03685

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6DSS RCSB PDB: 6DSS PDBe: 6DSS UniProt: Q8T6J6

Downloads

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