ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ef0J2 - ECOD Domain | ECOD

ECOD/Domains/e6ef0J2

e6ef0J2

UID: 002413227

PDB

Range: J:130-313
PDB: 6EF0 chain J(all domains)
UniProt: Q01939 (all domains)
Gene: RPT6

Molecule: 26S proteasome regulatory subunit 8 homolog

3D Structure

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Related Domains

Browse other domains in AAA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA(2004.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6EF0 RCSB PDB: 6EF0 PDBe: 6EF0 UniProt: Q01939

Downloads

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