ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6epkD2 - ECOD Domain | ECOD

ECOD/Domains/e6epkD2

e6epkD2

UID: 002413350

PDB

Range: D:296-407
PDB: 6EPK chain D(all domains)
UniProt: Q6DV88 (all domains)

Molecule: Envelope protein E

3D Structure

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Related Domains

Browse other domains in Flavi_glycop_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyFlavi_glycop_C(11.1.1.43)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4
DrugBank DB14546
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02832Flavi_glycop_C

Flavivirus glycoprotein, immunoglobulin-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 6EPK RCSB PDB: 6EPK PDBe: 6EPK UniProt: Q6DV88

Downloads

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