ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6erhD1 - ECOD Domain | ECOD

ECOD/Domains/e6erhD1

e6erhD1

UID: 002413392

PDB

Range: D:242-543
PDB: 6ERH chain D(all domains)
UniProt: P13010 (all domains)
Gene: XRCC5

Molecule: X-ray repair cross-complementing protein 5

3D Structure

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Related Domains

Browse other domains in Ku,Ku_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSPOC domain-like(60)

HH-groupSPOC domain-related(60.1)

TT-groupKu70/80 subunit middle domain(60.1.2)

FFamilyKu,Ku_C(60.1.2.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ku70/Ku80 beta-barrel domain

ClanCL0616SPOC

Ku70/Ku80 C-terminal arm

External Links

ECOD PDB View: 6ERH RCSB PDB: 6ERH PDBe: 6ERH UniProt: P13010

Downloads

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