ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6g3yB2 - ECOD Domain | ECOD

ECOD/Domains/e6g3yB2

e6g3yB2

UID: 002413840

PDB

Range: B:136-325
PDB: 6G3Y chain B(all domains)
UniProt: O08760 (all domains)
Gene: Ogg1

Molecule: N-glycosylase/DNA lyase

3D Structure

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Related Domains

Browse other domains in HhH-GPD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupDNA-glycosylase(102.1.2)

FFamilyHhH-GPD(102.1.2.1)

Ligands

in contact, ≤ 4 Å

4-(4-azanyl-2-oxidanylidene-3~{H}-benzimidazol-1-yl)-~{N}-(4-iodophenyl)piperidine-1-carboxamideELB
NICKEL (II) IONNI
metal

+ 1 additive (Acetate)

Acetate

Pfam Families

PF00730HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

ClanCL0198HHH

External Links

ECOD PDB View: 6G3Y RCSB PDB: 6G3Y PDBe: 6G3Y UniProt: O08760

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.