ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6gw2A1 - ECOD Domain | ECOD

ECOD/Domains/e6gw2A1

e6gw2A1

UID: 002414151

PDB

Range: A:226-538
PDB: 6GW2 chain A(all domains)
UniProt: Q5F4T5 (all domains)

Molecule: Capsid protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat_C(10.2.1.43)

Ligands

in contact, ≤ 4 Å

Taurochenodeoxycholic acidTUD
drugDrugBank DB08833

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6GW2 RCSB PDB: 6GW2 PDBe: 6GW2 UniProt: Q5F4T5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure