ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6msjE2 - ECOD Domain | ECOD

ECOD/Domains/e6msjE2

e6msjE2

UID: 002416252

PDB

Range: E:115-304
PDB: 6MSJ chain E(all domains)
UniProt: P62333 (all domains)
Gene: PSMC6

Molecule: 26S proteasome regulatory subunit 10B

3D Structure

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Related Domains

Browse other domains in AAA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA(2004.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ATPATP
drugDrugBank DB00171
Magnesium ion

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6MSJ RCSB PDB: 6MSJ PDBe: 6MSJ UniProt: P62333

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.