ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w5tN2 - ECOD Domain | ECOD

ECOD/Domains/e5w5tN2

e5w5tN2

UID: 002417109

PDB

Range: N:305-421
PDB: 5W5T chain N(all domains)
UniProt: P39669 (all domains)
Gene: glgC

Molecule: Glucose-1-phosphate adenylyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep_GlmU →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep_GlmU(208.1.1.15)

Ligands

in contact, ≤ 4 Å

Ethyl pyruvate9X7
drugDrugBank DB05869

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF24894Hexapep_GlmU

GlmU-like, C-terminal hexapeptide

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 5W5T RCSB PDB: 5W5T PDBe: 5W5T UniProt: P39669

Downloads

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Sulfate ion

Shown in the structure viewer. Drug annotations from DrugDomain.