ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xmyC1 - ECOD Domain | ECOD

ECOD/Domains/e5xmyC1

e5xmyC1

UID: 002417183

PDB

Range: C:855-915
PDB: 5XMY chain C(all domains)
UniProt: Q5VWG9 (all domains)
Gene: TAF3

Molecule: Transcription initiation factor TFIID subunit 3

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 5XMY RCSB PDB: 5XMY PDBe: 5XMY UniProt: Q5VWG9

Downloads

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