ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yqoA1 - ECOD Domain | ECOD

ECOD/Domains/e5yqoA1

e5yqoA1

UID: 002417337

PDB

Range: A:51-188,A:233-356
PDB: 5YQO chain A(all domains)
UniProt: Q8IXJ6 (all domains)
Gene: SIRT2

Molecule: NAD-dependent protein deacetylase sirtuin-2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

N-[4-[[3-[2-(4,6-dimethylpyrimidin-2-yl)sulfanylethanoylamino]phenyl]methoxy]phenyl]-1-methyl-pyrazole-4-carboxamideL5C

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5YQO RCSB PDB: 5YQO PDBe: 5YQO UniProt: Q8IXJ6

Downloads

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