ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yvlB1 - ECOD Domain | ECOD

ECOD/Domains/e5yvlB1

e5yvlB1

UID: 002417414

PDB

Range: B:28-225
PDB: 5YVL chain B(all domains)
UniProt: A0A076NBW8 (all domains)
Gene: hpiU5

Molecule: cyclase

3D Structure

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Related Domains

Browse other domains in HpiC1-like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyHpiC1-like(10.32.1.91)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-(2-METHOXYETHOXY)ETHANOLPG0

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22825HpiC1-like

HpiC1 cyclase

ClanCL0202GBD

External Links

ECOD PDB View: 5YVL RCSB PDB: 5YVL PDBe: 5YVL UniProt: A0A076NBW8

Downloads

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