ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yvlC1 - ECOD Domain | ECOD

ECOD/Domains/e5yvlC1

e5yvlC1

UID: 002417415

PDB

Range: C:27-225
PDB: 5YVL chain C(all domains)
UniProt: A0A076NBW8 (all domains)
Gene: hpiU5

Molecule: cyclase

3D Structure

Loading viewer...

Related Domains

Browse other domains in HpiC1-like →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyHpiC1-like(10.32.1.91)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-(2-METHOXYETHOXY)ETHANOLPG0

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22825HpiC1-like

HpiC1 cyclase

ClanCL0202GBD

External Links

ECOD PDB View: 5YVL RCSB PDB: 5YVL PDBe: 5YVL UniProt: A0A076NBW8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure